Public Member Functions | |
| def | __init__ |
| __init__() initializes a LightAnimal() object. | |
| def | printme |
| printme() prints a summary of the data stored in the LightAnimal() object. | |
| def | stringme |
| stringme() returns a summary of the data stored in the LightAnimal() object as a string. | |
| def | dictme |
| dictme() returns a summary of the data stored in the NewAnimal() object as a dictionary. | |
| def | trap |
| trap() checks for common errors in LightAnimal() objects | |
| def | pad_id |
| pad_id() takes an Animal ID, pads it to fifteen digits, and prepends the birthyear (or 1950 if the birth year is unknown). | |
| def | string_to_int |
| string_to_int() takes an Animal/Sire/Dam ID as a string and returns a hash. | |
Public Attributes | |
| animalID | |
| originalID | |
| sireID | |
| damID | |
| sex | |
| by | |
| paddedID | |
It is a much simpler object than the NewAnimal() object and is intended for use with the graph theoretic routines in pyp_network. The only attributes of these objects are: animal ID, sire ID, dam ID, original ID, birth year, and sex.
The LightAnimal() class holds animals records read from a pedigree file. It is a much simpler object than the NewAnimal() object and is intended for use with the graph theoretic routines in pyp_network. The only attributes of these objects are: animal ID, sire ID, dam ID, original ID, birth year, and sex.A simple class to hold animals records read from a pedigree file.
Definition at line 2069 of file pyp_newclasses.py.
| def PyPedal::pyp_newclasses::LightAnimal::__init__ | ( | self, | ||
| locations, | ||||
| data, | ||||
| mykw | ||||
| ) |
__init__() initializes a LightAnimal() object.
| locations | A dictionary containing the locations of variables in the input line. | |
| data | The line of input read from the pedigree file. |
__init__() initializes a LightAnimal() object.
Definition at line 2083 of file pyp_newclasses.py.
| def PyPedal::pyp_newclasses::LightAnimal::printme | ( | self | ) |
printme() prints a summary of the data stored in the LightAnimal() object.
| self | Reference to the current LightAnimal() objectPrint the contents of an animal record - used for debugging. |
Definition at line 2137 of file pyp_newclasses.py.
| def PyPedal::pyp_newclasses::LightAnimal::stringme | ( | self | ) |
stringme() returns a summary of the data stored in the LightAnimal() object as a string.
| self | Reference to the current LightAnimal() objectReturn the contents of an animal record as a string. |
Definition at line 2153 of file pyp_newclasses.py.
| def PyPedal::pyp_newclasses::LightAnimal::dictme | ( | self | ) |
dictme() returns a summary of the data stored in the NewAnimal() object as a dictionary.
| self | Reference to the current NewAnimal() objectReturn the contents of an animal record in a dictionary. |
Definition at line 2172 of file pyp_newclasses.py.
| def PyPedal::pyp_newclasses::LightAnimal::trap | ( | self | ) |
trap() checks for common errors in LightAnimal() objects
| self | Reference to the current LightAnimal() objectTrap common errors in pedigree file entries. |
Definition at line 2192 of file pyp_newclasses.py.
| def PyPedal::pyp_newclasses::LightAnimal::pad_id | ( | self | ) |
pad_id() takes an Animal ID, pads it to fifteen digits, and prepends the birthyear (or 1950 if the birth year is unknown).
The order of elements is: birthyear, animalID, count of zeros, zeros.
| self | Reference to the current LightAnimal() object |
Take an Animal ID, pad it to fifteen digits, and prepend the birthyear (or 1900 if the birth year is unknown). The order of elements is: birthyear, animalID, count of zeros, zeros.
Definition at line 2211 of file pyp_newclasses.py.
| def PyPedal::pyp_newclasses::LightAnimal::string_to_int | ( | self, | ||
| idstring, | ||||
mymaxint = 9223372036854775807 | ||||
| ) |
string_to_int() takes an Animal/Sire/Dam ID as a string and returns a hash.
Convert a string to an integer.
Definition at line 2230 of file pyp_newclasses.py.
1.5.5